Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX465834: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-315562' containing sample 'BTB04-416'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.6M spots, 520M bases, 224.9Mb downloads

UUID: 99d82ccc-794a-414e-b2a1-1f2995404e85

Design: Illumina sequencing of Mycobacterium tuberculosis BTB04-416 via random selection

Submitted by: Broad Institute (BI)

Study: TB Sweden

PRJNA229223 • SRP036652 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis BTB04-416

SAMN02414858 • SRS553704 • All experiments • All runs

Organism: Mycobacterium tuberculosis BTB04-416

Library:

Name: Pond-315562

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 446980.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:57CYN

material_type: DNA:DNA Somatic

product_order: PDO-2530

product_part_number: P-MCV-0001

project: G54321

research_project: RP-114

root_sample_id: SM-4PMLZ

sample_id: SM-57CYN

work_request: 39305

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-02 16:27:25.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.6M spots, 520M bases, 224.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1162695	1,268,120	256.2M	110Mb	2014-02-06
SRR1166879	1,306,384	263.9M	114.9Mb	2014-02-10

ID:: 646022

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